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| Status |
Public on Oct 01, 2015 |
| Title |
Expression data of 8 rice accessions under cold stress in seedling stage |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by array
|
| Summary |
Low temperature is one of the major abiotic stresses limiting rice growth and productivity, it is urgent to reveal the genetic and molecular mechanisms of plant responses to low temperature stress and to search for useful genetic resources for improving low-temperature tolerance. the 8 accessions from China Core Collection include 4 cold tolerance accessions, 3 sensitivity accessions and 1 intermediate type accession.
We used microarrays to detail variation of the gene expression after cold treatment and screen more cold-response genes in rice.
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| Overall design |
In order to getting more understanding of gene expression after cold treatment in rice seedling stage, we applied 8 accessions by cold stress screening in this Affymetrix microarrays, and each accession include 3 time-points samples: (1) before the cold treatment; (2) 6 hours after the cold treatment; (3) 24 hours after the cold treatment.
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| Contributor(s) |
Ye H, Lv Y, Xiong L |
| Citation(s) |
26381647, 28062835 |
| |
| Submission date |
Aug 03, 2015 |
| Last update date |
Dec 27, 2017 |
| Contact name |
Hanyan Ye |
| Organization name |
HuaZhong Agricultural University
|
| Lab |
National Key Laboratory of Crop Genetic Improvement
|
| Street address |
No. 5, Shizishan street
|
| City |
Wuhan |
| State/province |
Hubei |
| ZIP/Postal code |
430070 |
| Country |
China |
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| Platforms (1) |
| GPL2025 |
[Rice] Affymetrix Rice Genome Array |
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| Samples (24)
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| Relations |
| BioProject |
PRJNA291847 |
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