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| Status |
Public on Mar 08, 2016 |
| Title |
Tiling array hybridizations of genomic DNA from Staphylococcus aureus HG001. |
| Platform organism |
Staphylococcus aureus subsp. aureus NCTC 8325 |
| Sample organism |
Staphylococcus aureus |
| Experiment type |
Other
|
| Summary |
This analysis is part of the study Whole-transcriptome analysis of Staphylococcus aureus under laboratory and infection-mimicking conditions (Mäder, Nicolas et al., to be submitted) where the S. aureus HG001 transcriptome was analyzed under more than 40 different bilogical conditions.
Genomic DNA was prepared from four independent cultures of S. aureus HG001 cells; after sonication, DNA was labeled with Cy3 and hybridized to tiling arrays.
The data are used in transcriptome studies to compute expression intensities from raw intensity data using a model of shift and drift.
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| Overall design |
genomic DNA from wild type
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| Contributor(s) |
Mäder U, Nicolas P, Schaffer M |
| Citation(s) |
27035918 |
| |
| Submission date |
Jun 19, 2015 |
| Last update date |
Jun 07, 2016 |
| Contact name |
Pierre Nicolas |
| E-mail(s) |
pierre.nicolas@inrae.fr
|
| Phone |
+33-1-3465-2894
|
| Organization name |
INRAE - Université Paris-Saclay
|
| Lab |
MaIAGE
|
| Street address |
INRAE - Domaine de Vilvert
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| City |
Jouy-en-Josas |
| ZIP/Postal code |
F-78350 |
| Country |
France |
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| Platforms (1) |
| GPL20589 |
BaSysBio Staphylococcus aureus T1 385K array 080604_SA_JH_Tiling (probe level) |
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| Samples (4)
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| This SubSeries is part of SuperSeries: |
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| Relations |
| BioProject |
PRJNA287529 |
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