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Series GSE68704 Query DataSets for GSE68704
Status Public on Oct 03, 2016
Title Hyaluronan and TLR4 Regulate Alveolar Stem Cell Renewal and Prevent Severe Pulmonary Fibrosis
Organism Mus musculus
Experiment type Expression profiling by array
Summary The successful repair of alveolar epithelial injury is required to restore the integrity of gas exchanging regions of the lung and preserve organ function. Severe pulmonary fibrosis is the result of repeated episodes of epithelial injury, activation of fibroblasts, and matrix accumulation. Thus, impaired alveolar epithelial progenitor cell renewal could contribute to the progression of fibrosis. We provide evidence that expression of TLR4 and hyaluronan (HA) on Type 2 alveolar epithelial cells (AEC2s) is necessary for self-renewal. Either deletion of TLR4 or HA synthase 2 leads to impaired regeneration of AEC2s, severe fibrosis and mortality, in part due to blunted production of IL-6. AEC2s from patients with pulmonary fibrosis have reduced cell surface HA, and impaired renewal capacity, suggesting that interactions between HA and TLR4 are key regulators of lung stem cell renewal, repair of lung injury and that severe pulmonary fibrosis is the result of epithelial stem cell failure.
We used microarrays to detail the gene expression of AEC2 cells from WT and TLR4-/- mice.
 
Overall design AEC2 cells were flow sorted from either untreated lungs or the lungs 4 days after bleomycin from WT or TLR4-/- mice. RNA were extracted and hybridized on Affymetrix microarrays.
 
Contributor(s) Liang J, Zhang Y, Xie T, Chen H, Barkauskas C, Stripp B, LHogan B, Jiang D, Noble PW
Citation(s) 27694932
Submission date May 08, 2015
Last update date Oct 24, 2019
Contact name ting Xie
Organization name Cedars-Sinai Medical Center
Department Pulmonary
Street address 127 San Vicente Blvd
City Los Angeles
State/province CA
ZIP/Postal code 90034
Country USA
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (4)
GSM1679352 Day0WTATII
GSM1679353 Day0TLR4koATII
GSM1679354 Day4WTATII
Relations
BioProject PRJNA283423

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68704_RAW.tar 14.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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