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Series GSE67324 Query DataSets for GSE67324
Status Public on Feb 16, 2016
Title High-fat diet enhances stemness and tumorigenicity of intestinal progenitors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Little is known about how pro-obesity diets regulate tissue stem and progenitor cell function. Here we find that high fat diet (HFD)-induced obesity augments the numbers and function of Lgr5+ intestinal stem cells (ISCs) of the mammalian intestine. Like HFD, ex vivo treatment of intestinal organoid cultures with palmitic acid (PA), a constituent of the HFD, enhances the self-renewal potential of these organoid bodies. Mechanistically, HFD induces a robust peroxisome proliferator-activated receptor delta (PPAR-delta signature in intestinal stem and progenitor cells and pharmacologic activation of PPAR-delta recapitulates the effects that HFD has on these cells. Interestingly, HFD- and agonist-activated PPAR-delta signaling endows organoid-initiating capacity to non-stem cells and enforced PPAR-delta signaling permits these non-stem cells to form in vivo tumors upon loss of the tumor suppressor Apc. These findings highlight how diet-modulated PPAR-delta activation alters not only the function of intestinal stem and progenitor cells but also their capacity to initiate tumors.
 
Overall design mRNA profiles of intestinal stem cells (GFP-Hi) and progenitors (GFP-Low) from WT or HFD fed mice were generated by deep sequencing using HiSeq 2000.
 
Contributor(s) Yilmaz OH
Citation(s) 26935695
Submission date Mar 26, 2015
Last update date May 15, 2019
Contact name Omer H Yilmaz
Organization name Koch Institute for Integrated Cancer Research at MIT
Department Biology
Street address 77 Massachusetts Avenue, 76-353D
City Cambridge
State/province MA
ZIP/Postal code 02139
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (4)
GSM1644856 HFD_intestinal stem cells
GSM1644857 HFD_progenitors
GSM1644858 WT_intestinal stem cells
Relations
BioProject PRJNA279509
SRA SRP056597

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Supplementary file Size Download File type/resource
GSE67324_RAW.tar 540.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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