|
| Status |
Public on Aug 24, 2015 |
| Title |
Conserved Molecular Program for Root Development in Diverse Plants |
| Organisms |
Cucumis sativus; Arabidopsis thaliana; Glycine max; Solanum lycopersicum; Oryza sativa; Zea mays; Selaginella moellendorffii |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We define genome-wide temporal expression patterns of root development genes in seven vascular plants, enabling a detailed comparative analysis of the molecular development of a single organ across diverse species.
|
| |
|
| Overall design |
Measuring mRNA expression of the root development zones in 7 vascular plants. Each measurement includes 3 biological replicates.
|
| |
|
| Contributor(s) |
Schiefelbein J, Huang L |
| Citation(s) |
26265761 |
| Submission date |
Jan 05, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
John Schiefelbein |
| E-mail(s) |
schiefel@umich.edu
|
| Phone |
734-764-3580
|
| Organization name |
University of Michigan
|
| Department |
Molecular, Cellular, and Developmental Biology
|
| Street address |
830 North University Avenue
|
| City |
Ann Arbor |
| State/province |
Michigan |
| ZIP/Postal code |
48109 |
| Country |
USA |
| |
|
| Platforms (7)
|
| GPL13160 |
Illumina HiSeq 2000 (Oryza sativa) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
| GPL15008 |
Illumina HiSeq 2000 (Glycine max) |
| GPL15463 |
Illumina HiSeq 2000 (Zea mays) |
| GPL16310 |
Illumina HiSeq 2000 (Cucumis sativus) |
| GPL16345 |
Illumina HiSeq 2000 (Solanum lycopersicum) |
| GPL19601 |
Illumina HiSeq 2000 (Selaginella moellendorffii) |
|
| Samples (60)
|
|
| Relations |
| BioProject |
PRJNA271595 |
| SRA |
SRP051696 |
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