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Series GSE60990 Query DataSets for GSE60990
Status Public on Dec 07, 2014
Title Mutations in G protein beta subunits promote transformation and kinase inhibitor resistance.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Activating mutations of G protein alpha subunits (Ga) occur in 4-5% of all human cancers1 but oncogenic alterations in beta subunits (Gb) have not been defined. Here we demonstrate that recurrent mutations in the Gb proteins GNB1 and GNB2 confer cytokine-independent growth and activate canonical G protein signaling. Multiple mutations in GNB1 affect the protein interface that binds Ga subunits as well as downstream effectors, and disrupt Ga-Gbg interactions. Different mutations in Gb proteins clustered to some extent based on lineage; for example, all eleven GNB1 K57 mutations were in myeloid neoplasms while 6 of 7 GNB1 I80 mutations were in B cell neoplasms. Expression of patient-derived GNB1 alleles in Cdkn2a-deficient bone marrow followed by transplantation resulted in either myeloid or B cell malignancies. In vivo treatment with the dual PI3K/mTOR inhibitor BEZ235 suppressed GNB1-induced signaling and markedly increased survival. In several human tumors, GNB1 mutations co-occurred with oncogenic kinase alterations, including BCR/ABL, JAK2 V617F and BRAF V600K. Co-expression of patient-derived GNB1 alleles with these mutant kinases resulted in inhibitor resistance in each context. Thus, GNB1 and GNB2 mutations confer transformed and resistance phenotypes across a range of human tumors and may be targetable with inhibitors of G protein signaling.
 
Overall design The GM-CSF dependent human cell line TF-1 was transduced with a retrovirus expressing GNB1 K89E or empty vector. RNA was extracted from cells 12 hours after withdrawal of GM-CSF and from cells maintained in GM-CSF. Biological triplicates of each condition were performed. Gene expression differences were calculated between the four conditions.
 
Contributor(s) Yoda A, Chapuy B, Lane AA
Citation(s) 25485910
Submission date Sep 02, 2014
Last update date Jan 06, 2017
Contact name Andrew Lane
E-mail(s) aalane@partners.org
Phone 617-632-4589
Organization name Dana-Farber Cancer Institute
Street address 450 Brookline Ave
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL19145 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [CDF: hugene10st_Hs_ENSG_16.0.0]
Samples (12)
GSM1495283 TF-pMSCVpuro-Cytokine withdrawl-replicate 1
GSM1495284 TF-pMSCVpuro-Cytokine withdrawl-replicate 2
GSM1495285 TF-pMSCVpuro-Cytokine withdrawl-replicate 3
Relations
BioProject PRJNA260048

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60990_RAW.tar 79.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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