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Series GSE58929 Query DataSets for GSE58929
Status Public on Dec 23, 2014
Title Exercise promotes growth and vascularization of fast skeletal muscle by activating myogenic and angiogenic transcriptional programs in adult zebrafish
Organism Danio rerio
Experiment type Expression profiling by array
Summary The adult skeletal muscle is a plastic tissue with a remarkable ability to adapt to different levels of activity by altering its excitability, its contractile and metabolic phenotype and its mass. Knowledge on the mechanisms responsible for muscle mass comes primarily from models of muscle inactivity or denervation or from genetic models of muscle diseases. Given that the underlying exercise-induced transcriptional mechanisms regulating muscle mass are not fully understood, here we investigated the cellular and molecular adaptive mechanisms taking place in fast skeletal muscle of adult zebrafish in response to swimming. Fish were trained at low swimming speed (0.1 m/s; non-exercised) or at their optimal swimming speed (0.4 m/s; exercised). A significant increase in fibre cross-sectional area (1,290 ± 88 vs. 1,665 ± 106 μm2) and vascularization (298 ± 23 vs. 458 ± 38 capillaries/mm2) was found in exercised over non-exercised fish. Gene expression profiling evidenced the transcriptional activation of a series of complex networks of extracellular and intracellular signaling molecules and pathways involved in the regulation of muscle mass, myogenesis and angiogenesis, many (e.g. BMP, TGF, FGF, Notch, Wnt, MEF2, Shh, EphrinB2) not previously associated with exercise-induced contractile activity, and that recapitulate in part the transcriptional events occurring during skeletal muscle regeneration. These results demonstrate that fibre hypertrophy is responsible for the growth-promoting effects of exercise accompanied by a switch to a more oxidative capacity of white muscle fibres to fuel the increased energy demands. Importantly, our study identified novel molecular mechanisms regulating muscle mass and function in vertebrates.
 
Overall design Adult zebrafish were subjected or not to a swim training regime consisting of swimming at the optimal swimming speed for this species for 6 h/day, 5 days/week for a total of 4 weeks (20 experimental days). Total RNA of fast muscle from individual non-exercised (n = 8) and exercised (n = 8) zebrafish was analyzed.
 
Contributor(s) Planas JV
Citation(s) 25518849
Submission date Jun 30, 2014
Last update date Dec 24, 2014
Contact name Josep V Planas
E-mail(s) jplanas@ub.edu
Phone +34-93-4039384
Organization name Universitat de Barcelona
Department Fisiologia i Immunologia (Biologia)
Lab Fisiologia Molecular de Peixos
Street address Av. Diagonal 643
City Barcelona
ZIP/Postal code 08028
Country Spain
 
Platforms (1)
GPL13390 Agilent-021626 Danio rerio LU/IBL_D.rerio_44k (Feature Number version)
Samples (16)
GSM1422401 Non-exercised biol. replicate 1
GSM1422402 Non-exercised biol. replicate 2
GSM1422403 Non-exercised biol. replicate 3
Relations
BioProject PRJNA253940

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58929_RAW.tar 35.3 Mb (http)(custom) TAR (of TXT)
GSE58929_differentially-expressed.txt.gz 379.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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