|
| Status |
Public on Dec 04, 2013 |
| Title |
Evolution of Translation Regulation in budding Yeast |
| Organisms |
Saccharomyces cerevisiae; Saccharomyces paradoxus; Saccharomyces cerevisiae x Saccharomyces paradoxus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
Comparison of translation efficiency in S. cerevisiae, S. paradoxus, and their F1 hybrid.
|
| |
|
| Overall design |
SRA submission number SRP028552; BioProject number PRJNA213844; Ribosome profiling was used to compare mRNA abundance, ribosome occupancy, and translation efficiency in two yeast species and their F1 hybrid.
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| |
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| Contributor(s) |
McManus CJ, May GE, Spealman P, Shteyman A |
| Citation(s) |
24318730 |
| BioProject |
PRJNA213844 |
| |
| Submission date |
Nov 05, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Charles Joel McManus |
| E-mail(s) |
mcmanus@andrew.cmu.edu
|
| Organization name |
Carnegie Mellon University
|
| Department |
Biological Sciences
|
| Lab |
McManus Lab
|
| Street address |
4400 Fifth Ave
|
| City |
Pittsburgh |
| State/province |
Pennsylvania |
| ZIP/Postal code |
15090 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL13821 |
Illumina HiSeq 2000 (Saccharomyces cerevisiae) |
| GPL17601 |
Illumina HiSeq 2000 (Saccharomyces cerevisiae x Saccharomyces paradoxus) |
| GPL17602 |
Illumina HiSeq 2000 (Saccharomyces paradoxus) |
|
| Samples (12)
|
|
| Relations |
| SRA |
SRP028552 |
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