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Status |
Public on Feb 15, 2016 |
Title |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
Organisms |
Danio rerio; Mus musculus |
Experiment type |
Expression profiling by array Non-coding RNA profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
26857418 |
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Submission date |
Sep 19, 2013 |
Last update date |
May 15, 2019 |
Contact name |
Mark Ibberson |
Organization name |
SIB Swiss Institute of Bioinformatics
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Department |
Vital-IT
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Street address |
Genopode building
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City |
Lausanne |
ZIP/Postal code |
CH-1015 |
Country |
Switzerland |
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Platforms (4)
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GPL1319 |
[Zebrafish] Affymetrix Zebrafish Genome Array |
GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
GPL9319 |
Illumina Genome Analyzer II (Danio rerio) |
GPL10740 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] |
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Samples (34)
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GSM1234838 |
Heart, Sham, rep4 |
GSM1234839 |
Heart, Sham, rep5 |
GSM1234840 |
Heart, Sham, rep6 |
GSM1234841 |
Heart, Infarcted, rep1 |
GSM1234842 |
Heart, Infarcted, rep2 |
GSM1234843 |
Heart, Infarcted, rep3 |
GSM1234844 |
Heart, Infarcted, rep4 |
GSM1234845 |
Heart, Infarcted, rep5 |
GSM1234846 |
Heart, Infarcted, rep6 |
GSM1234847 |
Heart, Control, rep1 |
GSM1234848 |
Heart, Control, rep2 |
GSM1234849 |
Heart, Control, rep3 |
GSM1234850 |
Heart, Control, rep4 |
GSM1234851 |
Heart, Resected, rep1 |
GSM1234852 |
Heart, Resected, rep2 |
GSM1234853 |
Heart, Resected, rep3 |
GSM1234854 |
Heart, Resected, rep4 |
GSM1234956 |
Heart, Resected, rep1 |
GSM1234957 |
Heart, Resected, rep2 |
GSM1234958 |
Heart, Resected, rep3 |
GSM1234959 |
Heart, Resected, rep4 |
GSM1234960 |
Heart, Control, rep1 |
GSM1234961 |
Heart, Control, rep2 |
GSM1234962 |
Heart, Control, rep3 |
GSM1234963 |
Heart, Control, rep4 |
GSM1234964 |
Heart, Sham, rep1 |
GSM1234965 |
Heart, Sham, rep2 |
GSM1234966 |
Heart, Sham, rep3 |
GSM1234967 |
Heart, Infarcted, rep1 |
GSM1234968 |
Heart, Infarcted, rep2 |
GSM1234969 |
Heart, Infarcted, rep3 |
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This SuperSeries is composed of the following SubSeries:
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GSE51012 |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
GSE51013 |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
GSE51018 |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
GSE51019 |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
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Relations |
BioProject |
PRJNA219631 |
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