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Series GSE49003 Query DataSets for GSE49003
Status Public on Jul 19, 2013
Title Gene expression analysis of metastatic and non-metastatic osteosarcoma cell lines
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of two metastatic OS cell lines, KHOS and KRIB, and two non-metastatic OS cell lines, HOS and U2OS. Results show differences in gene expression between cell lines with different ability to metastasise in vivo.
 
Overall design Each of the four cell lines were analyzed in tripicate. Total RNA was extracted from each triplicate cell line culture with Trizol. cRNA was amplified using the Ambion Illumina Total Prep RNA Amplification Kit. Concentration was determined in NanoDrop and qulity checked in the Agilent Bioanalyzer, before hybridizing to Illumina HT-12 BeadChip Array.
 
Contributor(s) Endo-Munoz L, Saunders NA
Citation(s) 26317203
Submission date Jul 18, 2013
Last update date Jul 31, 2019
Contact name Liliana Beatriz Endo-Munoz
E-mail(s) l.munoz@uq.edu.au
Phone +61734436929
Organization name University of Queensland
Department Diamantina Institute
Lab Saunders
Street address TRI, 37 Kent St
City Woolloongabba
State/province Queensland
ZIP/Postal code 4102
Country Australia
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (12)
GSM1192008 KHOS 1
GSM1192009 KHOS 2
GSM1192010 KHOS 3
Relations
BioProject PRJNA212559

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49003_RAW.tar 6.2 Mb (http)(custom) TAR
GSE49003_non-normalized.txt.gz 1.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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