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Series GSE42302 Query DataSets for GSE42302
Status Public on Nov 16, 2012
Title Profiling of differentially expressed genes in sheep T lymphocytes response to Haemonchus contortus infection
Organism Ovis aries
Experiment type Expression profiling by array
Summary Once Haemonchus contortus infects sheep it receives a series of host attacks, especially those relating to the infected animal’s T lymphocytes immune response. To obtain a systematic genome-wide profiling of the T lymphocyte genes involved, microarrays were used to compare gene expression between 0 days post infection (dpi), 3-5 dpi, 25-30 dpi and 60dpi in infected sheep. In this 853, 242 and 42 differentially expressed genes were acquired in the 3d vs. 0d comparison, the 30d vs. 0d comparison and the 60d vs. 0d comparison, respectively. Gene Ontology and pathway analysis indicated that modulated genes including SUGT1, FCER1G, CD23, IL-13 and galectin-14, were mostly associated with cellular homeostasis maintaining and immune response.
 
Overall design Haemonchus contortus infection induced gene expression in sheep T lymphocytes was measured at 0, 3, 30 and 60 days post infection. Four time-series experiments were performed at each sheep (2#, 3# and 5#).
 
Contributor(s) Yang Y, Du A
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Submission date Nov 15, 2012
Last update date Nov 17, 2012
Contact name Aifang Du
E-mail(s) afdu@zju.edu.cn
Phone +86 571 8898 2583
Fax +86 571 8898 2583
Organization name Institute of Preventive Veterinary Medicine
Department College of Animal Sciences, Zhejiang University
Street address Yuhangtang Road 866
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310058
Country China
 
Platforms (1)
GPL16283 Agilent-028803 Custom Whole Sheep Genome Oligo Microarray
Samples (13)
GSM1037434 2# sheep 0 dpi
GSM1037435 2# sheep 3 dpi
GSM1037436 2# sheep 30 dpi
Relations
BioProject PRJNA181000

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42302_RAW.tar 80.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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