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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 01, 2013 |
| Title |
Mouse and zebrafish genes in vitro and in vivo |
| Organisms |
Danio rerio; Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
Gene expression of mouse cells was studied by extracting total RNA from cultured mouse mesenchymal stem cells (MSCs) and zebrafish injected with mouse MSCs, in addition the host response was studied by hybridizing the zebrafish RNA to zebrafish arrays.
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| Overall design |
Two-condition experiment, low passage MSCs vs high passage MSCs and tumorigenic MSCs, in vitro and inside zebrafish embryos.
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| Contributor(s) |
Mohseny AB, Cleton-Jansen A |
| Citation(s) |
22297719 |
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| Submission date |
Sep 27, 2011 |
| Last update date |
Apr 02, 2013 |
| Contact name |
Alex B Mohseny |
| E-mail(s) |
b.mohseny@lumc.nl
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| Phone |
+31 71 5266528
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| Fax |
+31 71 5248158
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| Organization name |
LUMC
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| Department |
Pathology
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| Street address |
Albinusdreef 2
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| City |
Leiden |
| ZIP/Postal code |
2333 ZA |
| Country |
Netherlands |
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| Platforms (2) |
| GPL14628 |
Agilent-026687 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) |
| GPL14629 |
Agilent_44k_021626 |
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| Samples (21)
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| GSM802529 |
B6-BMMSC low-passage cultured, mouse array |
| GSM802530 |
B6-BMMSC high-passage cultured, mouse array |
| GSM802531 |
BC-BMMSC low-passage cultured, mouse array |
| GSM802532 |
BC-BMMSC high-passage cultured, mouse array |
| GSM802533 |
Tumorigenic mouse MSCs (TmMSC) cultured, mouse array |
| GSM802534 |
Metastatic osteosarcomic MSCs (S1d/s) cultured, mouse array |
| GSM802535 |
B6-BMMSC low-passage injected, mouse array |
| GSM802536 |
B6-BMMSC high-passage injected, mouse array |
| GSM802537 |
BC-BMMSC low-passage injected, mouse array |
| GSM802538 |
BC-BMMSC high-passage injected, mouse array |
| GSM802539 |
Tumorigenic mous MSCs (TmMSC) injected, mouse array |
| GSM802540 |
Metastatic osteosarcomic MSCs (S1d/s) injected, mouse array |
| GSM802541 |
Cross-hybridization control uninjected zebrafish, mouse array |
| GSM802542 |
B6-BMMSC low-passage injected, zebrafish array |
| GSM802543 |
B6-BMMSC high-passage injected, zebrafish array |
| GSM802544 |
BC-BMMSC low-passage injected, zebrafish array |
| GSM802545 |
BC-BMMSC high-passage injected, zebrafish array |
| GSM802546 |
Tumorigenic mous MSCs (TmMSC) injected, zebrafish array |
| GSM802547 |
Metastatic osteosarcomic MSCs (S1d/s) injected, zebrafish array |
| GSM802548 |
Negative control PVP injected zebrafish, zebrafish array |
| GSM802549 |
Cross-hybridization control mouse MSCs, zebrafish array |
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| Relations |
| BioProject |
PRJNA147885 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE32428_RAW.tar |
88.8 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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