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Series GSE30072 Query DataSets for GSE30072
Status Public on Aug 15, 2011
Title ChIP-chip of DSB factors in wild type and pch2 strains
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary ChIP-chip was used to compare DSB factor localization in wild type and pch2 strains
 
Overall design 10 samples, 2-3 replicates each. Averaged data is available as a supplementary file on the Series record (below).
 
Contributor(s) Vader G, Blitzblau HG, Tame MA, Falk JE, Curtin L, Hochwagen A
Citation(s) 21822291
Submission date Jun 17, 2011
Last update date Jul 18, 2017
Contact name Andreas Hochwagen
E-mail(s) andi@nyu.edu
Organization name New York University
Lab Hochwagen lab
Street address 1009 Silver Center 100 Washington Square East
City New York
State/province NY
ZIP/Postal code 10003
Country USA
 
Platforms (1)
GPL5991 Agilent-015239 Yeast Whole Genome ChIP-on-chip Microarray (G4493A)
Samples (25)
GSM744414 Hop1 ChIP in wild type cells replicate 1
GSM744415 Hop1 ChIP in wild type cells replicate 2
GSM744416 Hop1 ChIP in pch2 cells replicate 1
This SubSeries is part of SuperSeries:
GSE30073 Mapping of meiotic double-strand break (DSB) sites and DSB factor association near repetitive DNA elements in S. cerevisiae
Relations
BioProject PRJNA155151

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30072_RAW.tar 302.3 Mb (http)(custom) TAR (of TXT)
GSE30072_averaged_matrix_series2.txt.gz 8.0 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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