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| Status |
Public on Jul 03, 2012 |
| Title |
Thermotoga maritima wild type minimal media expression analysis |
| Organism |
Thermotoga maritima MSB8 |
| Experiment type |
Expression profiling by genome tiling array
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| Summary |
An eight chip study using total RNA recovered from separate wild-type cultures of Thermotoga maritima at mid-log with 3 different minimal sugar media.
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| Overall design |
A eight-chip study using total RNA recovered from separate wild-type cultures of Thermotoga maritima at mid-log with 3 different minimal sugar media. 4 biological replicates maltose, 2 biological replicates L-arabinose, 2 biological replicates cellobiose.
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| Contributor(s) |
Lerman JA, Latif H |
| Citation(s) |
22760628 |
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| Submission date |
Apr 24, 2011 |
| Last update date |
Jul 10, 2012 |
| Contact name |
Daniel R Hyduke |
| E-mail(s) |
danielhyduke@gmail.com
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| Organization name |
Utah State University
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| Department |
Biological Engineering
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| Street address |
4105 Old Main Hill ENGR 402S
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| City |
Logan |
| State/province |
UT |
| ZIP/Postal code |
84322-4105 |
| Country |
USA |
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| Platforms (1) |
| GPL13446 |
NimbleGen Thermotoga maritima Tmar_Design_v2 |
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| Samples (8)
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| GSM713891 |
mid-log, maltose minimal media, biological replicate 1 |
| GSM713892 |
mid-log, maltose minimal media, biological replicate 2 |
| GSM713893 |
mid-log, maltose minimal media, biological replicate 3 |
| GSM713894 |
mid-log, maltose minimal media, biological replicate 4 |
| GSM713895 |
mid-log, L-arabinose minimal media, biological replicate 1 |
| GSM713896 |
mid-log, L-arabinose minimal media, biological replicate 2 |
| GSM713897 |
mid-log, cellobiose minimal media, biological replicate 1 |
| GSM713898 |
mid-log, cellobiose minimal media, biological replicate 2 |
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| Relations |
| BioProject |
PRJNA138779 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE28822_RAW.tar |
14.4 Mb |
(http)(custom) |
TAR (of CALLS, PAIR) |
| GSE28822_RMA_processed_matrix_Locus-tag.txt.gz |
65.4 Kb |
(ftp)(http) |
TXT |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
| Processed data are available on Series record |
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