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| Status |
Public on Jul 01, 2011 |
| Title |
Serpula lacrymans gene expression on different substrates |
| Organism |
Serpula lacrymans var. lacrymans S7.9 |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcript profiles of Serpula lacrymans grown on different substrates were analyzed. The array probes were designed from gene models taken from the Joint Genome Institute (JGI, department of energy) Serpula lacrymans genome sequence version 1. One aim of this study was to verify the expression of the automatically annotated gene models under various conditions. Another goal was to compare gene expression profiles from Serpula lacrymans grown on liquid MMN medium and on wood.
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| Overall design |
We performed 9 hybridizations (NimbleGen) with samples derived fromfrom Serpula lacrymans grown on liquid MMN medium and on wood.
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| Contributor(s) |
Högberg N, Kohler A, Ihrmark K, Rosling A, Tisserant E, Stenlid J, Martin F |
| Citation(s) |
21764756, 25706625 |
| |
| Submission date |
Mar 08, 2011 |
| Last update date |
May 15, 2015 |
| Contact name |
Annegret Kohler |
| E-mail(s) |
annegret.kohler@inrae.fr
|
| Phone |
+33 (0)383 394072
|
| Organization name |
INRAE
|
| Department |
UMR 1136
|
| Lab |
Interactions Arbres/Micro-organismes
|
| Street address |
Centre INRAE Grand Est Nancy
|
| City |
Champenoux |
| ZIP/Postal code |
54280 |
| Country |
France |
| |
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| Platforms (1) |
| GPL13241 |
Serpula lacrymans S7.9 whole genome expression array |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA138035 |
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