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Series GSE23441 Query DataSets for GSE23441
Status Public on Apr 01, 2011
Title IGROV1 gene expression analysis after in vivo locoregional treatment with CpG-ODN
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Toll-like receptor 9 synthetic agonist oligodeoxynucleotides expressing CpG motifs are currently evaluated for their anti-tumor activity, mainly in association with DNA-damaging drugs. Microarray expression analyses of genes implicates in DNA repair on tumor cells from mice treated with CpG-OD, revealed a down-regulation in tumor cells. These findings provide the first time evidence that immune cells upon TLR9 engagement can sensitize cancer cells to DNA damaging chemotherapy.
 
Overall design IGROV-1 human ovarian carcinoma cells were adapted to growth intraperitoneally (i.p.) and maintained by serial i.p. passages of ascitic cells into healthy mice as described. Mice were injected i.p. with 2.5 x 106 ascitic cells in 0.2 ml of saline and treated starting 10-11 days later, when mice showed evident and established ascites, with CpG-ODN [phosphorothioated ODN1826 (5’-TCCATGACGTTCCTGACGTT-3’), TriLink Biotechnologies (San Diego, CA, USA)]. delivered i.p. at a dose of 20 µg/mouse for 3 consecutive days or 1 time, control mice received saline (4 mice/group). 24 hours after the last treatment with saline or CpG-ODN, ascites-bearing mice were sacrificed by cervical dislocation. Tumor cells adhered to peritoneal wall were collected and extraction immediately frozen in liquid nitrogen until RNA extraction.
 
Contributor(s) De Cecco L, Balsari A, Sommariva M
Citation(s) 21878529
Submission date Aug 05, 2010
Last update date Aug 16, 2018
Contact name Loris De Cecco
E-mail(s) loris.dececco@istitutotumori.mi.it
Organization name IRCSS Istituto Nazionale Tumori
Street address via Venezian 1
City Milan
ZIP/Postal code 20133
Country Italy
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (8)
GSM575255 Saline 1 (tumor cells grown in mice)
GSM575256 CpG-ODN 2 (tumor cells grown in mice)
GSM575257 CpG-ODN 4 (tumor cells grown in mice)
This SubSeries is part of SuperSeries:
GSE23491 Gene expression profile of IGROV1 cells after treatment of saline or CpG-ODN
Relations
BioProject PRJNA133331

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23441_RAW.tar 6.2 Mb (http)(custom) TAR
GSE23441_non-normalized.txt.gz 2.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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