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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 22, 2023 |
| Title |
Low-level repressive histone marks fine-tune stemness gene transcription in neural stem cells |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by genome tiling array
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
37314324 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 NS107496 |
Multi-layered Control of the Exit from Stemness |
REGENTS OF THE UNIVERSITY OF MICHIGAN - ANN ARBOR |
Cheng-Yu Lee |
| R01 NS111647 |
Shared mechanisms regulate transcription-factor activity to control cell fate in neural stem cells and the embryo |
UNIVERSITY OF WISCONSIN MADISON |
Cheng-Yu Lee |
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| Submission date |
Nov 17, 2022 |
| Last update date |
Sep 22, 2023 |
| Contact name |
Arjun Rajan |
| E-mail(s) |
rarjun@umich.edu, leecheng@umich.edu
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| Organization name |
University of MIchigan
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| Department |
Life Science Institute
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| Lab |
Cheng-Yu Lee
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| Street address |
210 Washtenaw Avenue
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| City |
Ann Arbor |
| State/province |
Michigan |
| ZIP/Postal code |
48109 |
| Country |
USA |
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| Platforms (1) |
| GPL25244 |
Illumina NovaSeq 6000 (Drosophila melanogaster) |
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| Samples (28)
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| GSM6737960 |
iGG, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737961 |
fruC-myc, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737962 |
fruC-myc, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737963 |
fruCOM, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737964 |
fruCOM, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737965 |
Su(H), brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737966 |
Su(H), brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737967 |
trl, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737968 |
trl, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737969 |
Su(z)12, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737970 |
Su(z)12, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737971 |
Caf-1, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737972 |
Caf-1, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737973 |
H3K9me3, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737974 |
H3K9me3, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737975 |
H3K4me3, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737976 |
H3K4me3, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737977 |
H3K4me3, brat_null-fruC_null, CUT&RUN 1 |
| GSM6737978 |
H3K4me3, brat_null-fruC_null, CUT&RUN 2 |
| GSM6737979 |
H3K27me3, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737980 |
H3K27me3, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737981 |
H3K27me3, brat_null-fruC_null, CUT&RUN 1 |
| GSM6737982 |
H3K27me3, brat_null-fruC_null, CUT&RUN 2 |
| GSM6737983 |
H3K27ac, brat_null-fruC::myc, CUT&RUN 1 |
| GSM6737984 |
H3K27ac, brat_null-fruC::myc, CUT&RUN 2 |
| GSM6737985 |
H3K27ac, brat_null-fruC_null, CUT&RUN 1 |
| GSM6737986 |
H3K27ac, brat_null-fruC_null, CUT&RUN 2 |
| GSM6737991 |
typeII lineage, RFP+, scRNA-seq |
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| This SuperSeries is composed of the following SubSeries: |
| GSE218253 |
Low-level repressive histone marks fine-tune stemness gene transcription in neural stem cells [CUT&Tag] |
| GSE218255 |
Low-level repressive histone marks fine-tune stemness gene transcription in neural stem cells [scRNA-seq] |
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| Relations |
| BioProject |
PRJNA902811 |
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