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Series GSE217187 Query DataSets for GSE217187
Status Public on Nov 10, 2022
Title Interplay between acetylation and ubiquitination of Isw1 confers multidrug resistance in Cryptococcus neoformans
Organism Cryptococcus neoformans var. grubii H99
Experiment type Expression profiling by high throughput sequencing
Summary Cryptococcus neoformans poses a great threat to human communities, given that it quickly becomes resistant to available antifungal drugs. Herein, a conserved chromatin remodeler, Isw1, is shown to function as a master transcriptional modulator of genes responsible for multidrug resistance. It reciprocally controls drug resistance, and cells with disrupted ISW1 demonstrate profound resistance to fluconazole, ketoconazole, 5-fluorocytosine and 5-fluorouracil. Mass spectrometry reveals that Isw1 is both acetylated and ubiquitinated. These two protein posttranslational modifications confer an interplay regulation mechanism that controls Isw1 protein degradation via a ubiquitin-mediated proteasome and, consequently, C. neoformans resistance to drugs. Functional mutagenesis analysis of acetylation and ubiquitination sites reveals that the acetylation status of the lysine 97 residue on Isw1 coordinates its ubiquitination processes at lysines 113 and 441 by modulating the protein interactions between Isw1 and Cdc4, an E3 ligase. Clinical C. neoformans isolates overexpressing the undegradable ISW1 mutant demonstrate impaired drug-resistant phenotypes. Collectively, our studies reveal a sophisticated acetylation-Isw1-ubiquintation regulation axis that controls multidrug resistance in fungal pathogens.
 
Overall design Performed paired-end RNA-seq of Cryptococcus neoformans H99s as Control group and isw1∆ strains as in 50ml YPD broth at OD600=0.8 with 10μg/ml FLC, respectively in biological triplicates.
 
Contributor(s) Ding C
Citation(s) 38251723
Submission date Nov 03, 2022
Last update date Feb 14, 2024
Contact name Yang Meng
E-mail(s) mm13940381361@gmail.com
Organization name Northeastern University
Department College of Life and Health Sciences
Street address Wenhua street num 11
City shenyang
ZIP/Postal code 110819
Country China
 
Platforms (1)
GPL28230 HiSeq X Ten (Cryptococcus neoformans var. grubii H99)
Samples (6)
GSM6706382 HF1
GSM6706383 HF2
GSM6706384 HF3
Relations
BioProject PRJNA897880

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Supplementary file Size Download File type/resource
GSE217187_RAW.tar 190.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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