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Series GSE21616 Query DataSets for GSE21616
Status Public on Jun 14, 2010
Title Array CGH with DNA extracted from Candida albicans strains 3153A and its derivative Sor55, which is monosomic for chromosome 5
Organism Candida albicans
Experiment type Genome variation profiling by genome tiling array
Summary Goal of this experiment was to confirm the proposed monosomy condition of chromsome 5 genes in the mutant Sor55
 
Overall design Different batches of total DNA were prepared from the parental strain 3153A and its derivative Sor55. Hybridization included different combinations of two independent batches of DNA from 3153A or Sor55, as well as one dye-swap. Parental/mutant ratio data was analyzed.
 
Contributor(s) Kravets A, Gao Q, Qin H, Rustchenko E, Ahmad A, Bethlendy G
Citation(s) 20552010, 24702787
Submission date Apr 30, 2010
Last update date Aug 01, 2019
Contact name Elena Rustchenko
E-mail(s) elena_bulgac@urmc.rochester.edu
Phone 585-275-6710
Organization name University of Rochester
Department Biochemistry & Biophysics
Street address 601 Elmwood Ave., Box 712
City Rochester
State/province NY
ZIP/Postal code 14642
Country USA
 
Platforms (1)
GPL10372 NimlbeGen C. albicans HX3 tiling array [091120_Candida19_CSU_ASU]
Samples (3)
GSM539585 389134A01_2010-03-23
GSM539586 390608A02_2010-03-23
GSM539587 390608A03_2010-03-23
Relations
BioProject PRJNA126993

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE21616_RAW.tar 201.9 Mb (http)(custom) TAR (of PAIR, TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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