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| Status |
Public on Aug 17, 2022 |
| Title |
Revealing the increased stress response behavior through transcriptomic analysis of adult zebrafish brain after chronic and low to moderate dose rates of ionizing radiations |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We describe the transcriptomics data acquired on adult zebrafish after chronic exposure to low dose of IR (< 6mGy/h)
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| Overall design |
Comparative gene expression profiling analysis of RNA-seq data from dissected telencephalon obtained after exposure of adult zebrafish to 0.05 mGy/h, 0.5 mGy/h and 5 mGy/h during 36 days
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| Contributor(s) |
Cantabella E, Armant O |
| Citation(s) |
35954455 |
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| Submission date |
Jun 21, 2022 |
| Last update date |
Aug 19, 2022 |
| Contact name |
olivier ARMANT |
| E-mail(s) |
olivier.armant@irsn.fr
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| Organization name |
IRSN
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| Department |
SERIS
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| Lab |
LECO
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| Street address |
Cadarache BP3
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| City |
Saint Paul lez Durance |
| ZIP/Postal code |
13115 |
| Country |
France |
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| Platforms (1) |
| GPL21741 |
Illumina HiSeq 4000 (Danio rerio) |
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| Samples (21)
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| GSM6257036 |
0.5 mGy/h batch1, replicate 1 |
| GSM6257037 |
0.5 mGy/h batch1, replicate 2 |
| GSM6257038 |
0.5 mGy/h batch1, replicate 3 |
| GSM6257039 |
5 mGy/h batch1, replicate 1 |
| GSM6257040 |
5 mGy/h batch1, replicate 2 |
| GSM6257041 |
5 mGy/h batch1, replicate 3 |
| GSM6257042 |
Control batch 2, replicate 1 |
| GSM6257043 |
Control batch 2, replicate 2 |
| GSM6257044 |
Control batch 2, replicate 3 |
| GSM6257045 |
Control batch 2, replicate 4 |
| GSM6257046 |
Control batch 2, replicate 5 |
| GSM6257047 |
Control batch 2, replicate 6 |
| GSM6257048 |
0.05 mGy/h batch2, replicate 1 |
| GSM6257049 |
0.05 mGy/h batch2, replicate 2 |
| GSM6257050 |
0.05 mGy/h batch2, replicate 3 |
| GSM6257051 |
0.05 mGy/h batch2, replicate 4 |
| GSM6257052 |
0.05 mGy/h batch2, replicate 5 |
| GSM6257053 |
0.05 mGy/h batch2, replicate 6 |
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| Relations |
| BioProject |
PRJNA851399 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE206573_RAW.tar |
4.6 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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