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Series GSE198516 Query DataSets for GSE198516
Status Public on Mar 15, 2022
Title Genome-wide maps of H3K9Ac in wild type and sinhcaf mutant zebrafish embryos
Organism Danio rerio
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary H3K9Ac ChIP-Seq was conducted to investigate whether loss of sinhcaf increases the histone acetylation in the promoter region of kinesin family genes.Increased H3K9Ac ChIP-Seq peaks upon sinhcaf loss were detected in the kif26ab promoter region.
 
Overall design Examination of H3K9Ac in wild type and sinhcaf mutant zebrafish embryos by CHIP-Seq
 
Contributor(s) Tao B
Citation(s) 35532311
Submission date Mar 12, 2022
Last update date Jun 15, 2022
Contact name Binbin Tao
E-mail(s) taobinbin@ihb.ac.cn
Phone +68-027-68780076
Organization name Institute of Hydrobiology
Street address No. 7 Donghu South Road
City Wuhan
ZIP/Postal code 430072
Country China
 
Platforms (1)
GPL24776 BGISEQ-500 (Danio rerio)
Samples (5)
GSM5949796 KO_1 H3K9ac
GSM5949797 KO_2 H3K9ac
GSM5949798 KO_3 H3K9ac
Relations
BioProject PRJNA815669

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198516_RAW.tar 472.5 Mb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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