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Series GSE186754 Query DataSets for GSE186754
Status Public on Mar 25, 2022
Title RNA sequencing of tomato seedlings infected with Fusarium responding to an Artemissia Absinthium essential oil
Organism Solanum lycopersicum
Experiment type Expression profiling by high throughput sequencing
Summary Tomato seedlings with coated seeds of 12days responding to an Artemissia Absinthium essential oil shows increased tolarance to Fusarium
 
Overall design Tomato seeds were coated with an Artemissia absinthium essential oil growth and inoculated with Fusarium oxysporum sp. oxysporum radicis lycopersici, sampling tissues after 12 days of inoculation, for RNAseq analysis, three independent biological samples were sampled from three independent experiments.
 
Contributor(s) Berrocal-Lobo M, Poza-Carrión C, González-Coloma A, Andrés M
Citation(s) 35422834
Submission date Oct 28, 2021
Last update date Apr 20, 2022
Contact name Marta Berrocal-Lobo
E-mail(s) m.berrocal@upm.es
Organization name School of Forestry Engineering and Natural Resources
Department System and Natural Resources
Street address Antonio Nováis 10, s/n
City Madrid
State/province Madrid
ZIP/Postal code 28040
Country Spain
 
Platforms (1)
GPL25655 Illumina HiSeq 4000 (Solanum lycopersicum)
Samples (24)
GSM5660444 CR1
GSM5660445 CR2
GSM5660446 CR3
Relations
BioProject PRJNA775969
SRA SRP343617

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE186754_Expression_Profile_SL3_gene_ReadCount.txt.gz 1.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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