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Series GSE163645 Query DataSets for GSE163645
Status Public on Dec 22, 2020
Title Gene expression profiling of human-derived primary cardiomyocytes with lncRNA ZNF593-AS 5‘ end overexpression under phenylephrine stimulation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The aim of this study is to investigate molecular mechanisms underlying the function of lncRNA ZNF593-AS in cardiomyocyte under phenylephrine stimulation in vitro.
 
Overall design Human-derived primary cardiomyocytes were transfected with pcDNA3.1 or ZNF593-AS 5' end, the functional fragment of ZNF593-AS under the stimulation of phenylephrine. We extracted the total RNA 48h after the transfection and perform RNA-seq using Illimina platform.
 
Contributor(s) Fan J, Li H, Xie R
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Submission date Dec 21, 2020
Last update date Dec 23, 2020
Contact name rong xie
Organization name Huazhong university of science and technology
Street address Jiefang Ave.
City Wuhan
State/province Hubei
ZIP/Postal code 430030
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (6)
GSM4983407 PE_pcDNA3.1_rep1
GSM4983408 PE_pcDNA3.1_rep2
GSM4983409 PE_pcDNA3.1_rep3
Relations
BioProject PRJNA686998
SRA SRP298754

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163645_RPKM.xlsx 1.7 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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