|
| Status |
Public on Jan 01, 2021 |
| Title |
Using RNAseq for identifying hepatic genes involved in multi- (F1 generation) and transgenerational (F2 generation) responses to chronic benzo[a]pyrene exposure (F0 generation) in Xenopus tropicalis |
| Organism |
Xenopus tropicalis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We investigated the multi- and transgenerational impact of BaP on Xenopus females following F0 generation exposure from the tadpole to the mature adult stage at a concentration (50 ng.L-1). 5 females from F1 and F2 generations by parentale xposure conditions (control vs BaP) were used for studying liver transcriptome by RNAseq. RNA-seq libraries were sequenced on an illumina GAIIx sequencer as 75bp single reads
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| |
|
| Overall design |
mRNAseq from liver of mature F1 and F2 females.
|
| |
|
| Contributor(s) |
Reynaud S |
| Citation(s) |
33234375 |
| |
| Submission date |
May 20, 2020 |
| Last update date |
Jul 01, 2021 |
| Contact name |
Stéphane REYNAUD |
| E-mail(s) |
stephane.reynaud@univ-grenoble-alpes.fr
|
| Phone |
04 76 51 46 80
|
| Organization name |
Grenoble-Alpes University
|
| Lab |
Laboratory of alpine ecology
|
| Street address |
2233 rue de la piscine
|
| City |
Saint Martin d'Hères |
| ZIP/Postal code |
38400 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL24898 |
Illumina Genome Analyzer IIx (Xenopus tropicalis) |
|
| Samples (21)
|
|
| Relations |
| BioProject |
PRJNA634073 |
| SRA |
SRP262433 |
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