|
| Status |
Public on May 18, 2020 |
| Title |
Differential gene expression in WT v. MZoep-/- zebrafish gastrulae |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report RNA-sequencing data from zebrafish embryos lacking both maternal and zygotic expression of oep (which encodes Tdgf1) (MZoep-/-) at 90% epiboly stage. Transcripts were compared to stage-matched wild-type (WT) embryos to identify differentially expressed genes.
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| |
|
| Overall design |
Sequencing of ribo-depleted RNA from MZoep mutant and control WT embryos with 3 biological replicates per genotype.
|
| |
|
| Contributor(s) |
Williams M |
| Citation(s) |
32319426 |
| |
| Submission date |
Mar 20, 2020 |
| Last update date |
Jun 01, 2020 |
| Contact name |
Bo Zhang |
| E-mail(s) |
bzhang29@wustl.edu
|
| Phone |
3143624757
|
| Organization name |
Washington University School of Medicine
|
| Department |
Developmental Biology
|
| Lab |
Zhang
|
| Street address |
4515 McKinley Research Bldg 03212
|
| City |
Saint Louis |
| State/province |
Missouri |
| ZIP/Postal code |
63110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL23274 |
Illumina HiSeq 3000 (Danio rerio) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA613705 |
| SRA |
SRP253509 |
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