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| Status |
Public on Mar 01, 2021 |
| Title |
RNA-seq of hematopoietic stem and progenitor cells from 40 hours post fertilization ddx41 mutant and sibling zebrafish |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The purpose of the experiment was to define the gene expression and splicing alterations occurring when the levels of dead-box helicase 41 are lowered in embryonic zebrafish. Results provide insight the role of Ddx41 in hematopoietic development.
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| |
|
| Overall design |
mRNA profiling of cd41-positive hematopoietic stem and progenitor cells isolated from 40 hours post fertilization ddx41 mutant and sibling zebrafish using Illumina NovaSeq. Three samples were sequenced for each genotype.
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| |
|
| Contributor(s) |
Bowman TV |
| Citation(s) |
33651979 |
| |
| Submission date |
Mar 15, 2020 |
| Last update date |
Sep 25, 2022 |
| Contact name |
Teresa Bowman |
| E-mail(s) |
teresa.bowman@einstein.yu.edu
|
| Phone |
7184304001
|
| Organization name |
Albert Einstein College of Medicine
|
| Street address |
1300 Morris Park Ave
|
| City |
Bronx |
| State/province |
NY |
| ZIP/Postal code |
10461 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL24995 |
Illumina NovaSeq 6000 (Danio rerio) |
|
| Samples (6)
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| Relations |
| BioProject |
PRJNA612697 |
| SRA |
SRP252869 |
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