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Series GSE146200 Query DataSets for GSE146200
Status Public on Mar 03, 2020
Title Characterization of Triptolide-Induced Hepatotoxicity by Imaging and Transcriptomics in a Novel Zebrafish Model [miRA-seq]
Organism Danio rerio
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Zebrafish larvae treated with triptolide (5 dpf larvae after exposure to triptolide (1.6μM) for 6 hours) or vehicle control.
 
Overall design A total of 16 sequencing experiments were performed (control N=8 and treatment N=8). Each individual experiment consisted of 30 pooled larvae, therefore 480 larvae were included in total.
 
Contributor(s) Dear JW, Vliegenthart AD, Ivens A
Citation(s) 28962522
Submission date Mar 02, 2020
Last update date Mar 05, 2020
Contact name Alasdair Ivens
E-mail(s) al.ivens@ed.ac.uk
Phone 44 131 6513605
Organization name Centre for Immunity, Infection and Evolution
Street address Kings Buildings
City Edinburgh
ZIP/Postal code EH9 3FL
Country United Kingdom
 
Platforms (1)
GPL25922 NextSeq 550 (Danio rerio)
Samples (16)
GSM4368067 JD01 [miRNA-seq]
GSM4368068 JD02 [miRNA-seq]
GSM4368069 JD03 [miRNA-seq]
This SubSeries is part of SuperSeries:
GSE146201 Characterization of Triptolide-Induced Hepatotoxicity by Imaging and Transcriptomics in a Novel Zebrafish Model
Relations
BioProject PRJNA609696
SRA SRP251256

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146200_RAW.tar 8.0 Mb (http)(custom) TAR (of FA)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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