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| Status |
Public on Feb 01, 2020 |
| Title |
Transcription profiling of tomato plants overexpressing SlMYB14 |
| Organism |
Solanum lycopersicum |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In order to investigate the possible molecular mechanisms of SlMYB14 function in plant growth and stress responses, we employed the RNA-seq approach to identify the genes with altered expression levels in SlMYB14 transgenic plants.
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| Overall design |
RNA-sequencing was carried out using two independent transgenic lines (OE5, OE7). Total RNA was isolated with Trizol reagent (Invitrogen, USA) from the aerial part of the one-week-old seedlings of 35Spro:SlMYB14 （OE5 and OE7）and Zhongshu 4 (ZS4) plants grown in parallel under unstressed conditions. Materials from 10 plants of each genotype were pooled for RNA isolation.
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| Contributor(s) |
Li Z, Yao Q |
| Citation missing |
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| Submission date |
Dec 26, 2019 |
| Last update date |
Feb 01, 2020 |
| Contact name |
zhenjun li |
| E-mail(s) |
zhenjun_1234@aliyun.com
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| Organization name |
Shanghai academy of agricultural sciences
|
| Street address |
Beidi rd 2901
|
| City |
Shanghai |
| ZIP/Postal code |
201106 |
| Country |
China |
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| Platforms (1) |
| GPL16345 |
Illumina HiSeq 2000 (Solanum lycopersicum) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA597746 |
| SRA |
SRP238819 |
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