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Series GSE130036 Query DataSets for GSE130036
Status Public on Apr 19, 2019
Title Long non-coding and protein-coding RNA profiling using strand-specific RNA-seq in human hypertrophic cardiomyopathy
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Hypertrophic cardiomyopathy (HCM) represents one of the most common heritable heart diseases. However, the signalling pathways and regulatory networks underlying the pathogenesis of HCM remain largely unknown. Here, we present a strand-specific RNA-seq dataset for both coding and lncRNA profiling in myocardial tissues from 28 HCM patients and 9 healthy donors. This dataset constitutes a valuable resource for the community to examine the dysregulated coding and lncRNA genes in HCM versus normal conditions.
 
Overall design SRA Study accession:SRP186138; BioProject accession:PRJNA522931; Strand-specific RNA-seq of myocardial tissues from 28 HCM patients and 9 healthy donors using illumina Hiseq X Ten
 
Contributor(s) Liu X, Zhou Z
Citation(s) 31197155
BioProject PRJNA522931
Submission date Apr 18, 2019
Last update date Jul 21, 2019
Contact name Zhou Zhou
E-mail(s) zhouzhoufuwai@126.com
Organization name Fuwai Hospital, the Chinese Academy of Medical Sciences
Street address Beilishi Street 167, Xi Cheng District
City Beijing
ZIP/Postal code 100037
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (37)
GSM3730500 HCM269
GSM3730501 HCM273
GSM3730502 HCM282
Relations
SRA SRP186138

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130036_RAW.tar 108.1 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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