|
| Status |
Public on Apr 21, 2008 |
| Title |
Highly integrated epigenome maps in Arabidopsis - whole genome shotgun bisulfite sequencing |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
Part of a set of highly integrated epigenome maps for Arabidopsis thaliana.
Keywords: Illumina high-throughput bisulfite sequencing
|
| |
|
| Overall design |
Whole genome shotgun bisulfite sequencing of wildtype Arabidopsis plants (Columbia-0), and met1, drm1 drm2 cmt3, and ros1 dml2 dml3 null mutants using the Illumina Genetic Analyzer.
|
| |
|
| Contributor(s) |
Lister R, O'Malley RC, Tonti-Filippini J, Gregory BD, Berry CC, Millar AH, Ecker JR |
| Citation(s) |
18423832 |
| |
| Submission date |
Mar 27, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
Joseph R Ecker |
| E-mail(s) |
ecker@salk.edu
|
| Phone |
8584534100
|
| Organization name |
HHMI-Salk-Institute
|
| Department |
Genomic Analysis Laboratory
|
| Lab |
Ecker lab
|
| Street address |
10010 North Torrey Pines Road
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92037 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9062 |
Illumina Genome Analyzer (Arabidopsis thaliana) |
|
| Samples (4)
|
|
| This SubSeries is part of SuperSeries: |
| GSE10877 |
Highly integrated single base resolution maps of the epigenome in Arabidopsis |
|
| Relations |
| SRA |
SRP000539 |
| BioProject |
PRJNA108793 |
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