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Series GSE100892 Query DataSets for GSE100892
Status Public on Oct 18, 2018
Title Exercise in adult zebrafish promotes ventricular cardiomyocyte proliferation in the regenerating heart
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary Exercise promotes a set of physiological adaptations known to provide long-term health benefits and it can play an important role in cardioprotection. However, the mechanisms underlying exercise-induced cardiac adaptation are not fully understood. In the present study, we examined cardiac adaptive responses to exercise training in the adult zebrafish and in the context of cardiac regeneration.We found that swimming-induced exercise increased cardiomyocyte proliferation and that this response was also found under regenerating conditions, when exercise was performed either prior to and after ventricular cryoinjury (CI). Exercise prior to CI resulted in a mild improvement in cardiac function and lesion recovery over the non-exercise condition.Transcriptomic profiling of regenerating ventricles in cryoinjured fish subjected to exercise revealed a differential regulation of genes related toregeneration as well as other biological processes potentially involved in the exercise response. Taken together, these results suggest that exercise constitutes a physiological stimulus thatmay help promote cardiomiogenic mechanisms of the vertebrate heart and that the zebrafish exercise model may be useful for evaluating the potential cardioprotective effects of exercise.
 
Overall design mRNA profiles of adult zebrafish regenerating ventricles at 7 and 14 days post injury that were exercising or not, were compared.
 
Contributor(s) Planas JV
Citation(s) 30327615
Submission date Jul 06, 2017
Last update date May 15, 2019
Contact name Josep V. Planas
E-mail(s) jplanas@ub.edu
Organization name Universitat de Barcelona
Department Fisiologia i Immunologia (Biologia)
Lab Fisiologia Molecular de Peixos
Street address Av. Diagonal 643
City Barcelona
ZIP/Postal code 08028
Country Spain
 
Platforms (1)
GPL20828 Illumina NextSeq 500 (Danio rerio)
Samples (24)
GSM2695677 SHAM1_7dpi
GSM2695678 SHAM2_7dpi
GSM2695679 SHAM3_7dpi
Relations
BioProject PRJNA393356
SRA SRP111295

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE100892_Rovira2017_RNAseq_DEGs.csv.gz 1.2 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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