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LOC18033062 transcription factor bHLH36 [ Citrus x clementina ]

Gene ID: 18033062, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18033062
Gene description
transcription factor bHLH36
Locus tag
CICLE_v10006628mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18033062 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006261964.1 (28196590..28198072)

NW_006261964.1Genomic Context describing neighboring genes Neighboring gene receptor-like serine/threonine-protein kinase At4g25390 Neighboring gene uncharacterized LOC112097694 Neighboring gene transcription factor bHLH120 Neighboring gene transcription factor bHLH118

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006261964 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006261964.1 Reference Citrus_clementina_v1.0

    Range
    28196590..28198072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006421731.2 → XP_006421794.1  transcription factor bHLH36

    See identical proteins and their annotated locations for XP_006421794.1

    UniProtKB/TrEMBL
    V4U702
    Conserved Domains (1) summary
    pfam00010
    Location:76 → 128
    HLH; Helix-loop-helix DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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