4H10,1NLW,1HLO,4AYA,1A0A


Conserved Protein Domain Family
HLH

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pfam00010: HLH (this model, PSSM-Id:278439 is obsolete and has been replaced by 459628)
Click on image for an interactive view with Cn3D
Helix-loop-helix DNA-binding domain
Statistics
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PSSM-Id: 278439
Aligned: 149 rows
Threshold Bit Score: 32.1239
Created: 10-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4H10_A   9 AREahSQIEKRRRDKMNSFIDELASLVPT-Cn------------------------------------aMSRK-LDKLTV 50  human
Q9M1K0  77 KKLnhNASERDRRRKINSLFSSLRSCLPA-Sg-------------------------------------QSKK-LSIPAT 117 thale cress
Q9ZVB5  62 KKLnhNASERERRKKINTMFSSLRSCLPPtN--------------------------------------QTKK-LSVSAT 102 thale cress
P20824 646 KRTshKIAEQGRRNRINSALQEIATLLPK-ApakeggdgdgdghsssgggggsggadredkrekdkdkaGGGIpNSKAST 724 Neurospora crassa OR74A
Q19918  45 TRK--SVSERKRRDEINELLENLKTIVQN-Ps------------------------------------dSNEK-ISHETI 84  Caenorhabditis elegans
Q18053  17 GHR--SETEKQRRDDTNDLLNEFKKIVQK-S--------------------------------------ESEK-LSKEEV 54  Caenorhabditis elegans
Q18056 146 RRKvkTEREKIRRKKQDDCYAELKFFILNkQmgs---------------------------------yeQRLK-LERITI 191 Caenorhabditis elegans
4AYA_A  25 RSKtpVDDPMSLLYNMNDCYSKLKELVPSiP--------------------------------------QNKK-VSKMEI 65  human
P41134  56 LLD--EQQVNVLLYDMNGCYSRLKELVPTlP--------------------------------------QNRK-VSKVEI 94  human
1A0A_A   2 KREshKHAEQARRNRLAVALHELASLIPA-Ewkq---------------------------------qnVSAA-PSKATT 46  baker's yeast
4H10_A  51 LRMAVQHMKTLR 62  human
Q9M1K0 118 VSRSLKYIPELQ 129 thale cress
Q9ZVB5 103 VSQALKYIPELQ 114 thale cress
P20824 725 VEMAIEYIKQLQ 736 Neurospora crassa OR74A
Q19918  85 LFRVFERVSGVD 96  Caenorhabditis elegans
Q18053  55 LFRIVKLLSGIQ 66  Caenorhabditis elegans
Q18056 192 LEIIIDYIKHNS 203 Caenorhabditis elegans
4AYA_A  66 LQHVIDYILDLQ 77  human
P41134  95 LQHVIDYIRDLQ 106 human
1A0A_A  47 VEAACRYIRHLQ 58  baker's yeast
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