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LOC18017046 transcription factor ILR3 [ Eutrema salsugineum ]

Gene ID: 18017046, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18017046
Gene description
transcription factor ILR3
Locus tag
EUTSA_v10014564mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18017046 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256829.1 (10750846..10753223, complement)

NW_006256829.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat-containing protein At5g02620 Neighboring gene probable galacturonosyltransferase 12 Neighboring gene kinesin-like protein KIN-14N Neighboring gene 21.7 kDa class VI heat shock protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256829 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor ILR3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256829.1 Reference Eutsalg1_0

    Range
    10750846..10753223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006401483.2 → XP_006401546.1  transcription factor ILR3

    See identical proteins and their annotated locations for XP_006401546.1

    UniProtKB/TrEMBL
    V4LH22
    Conserved Domains (2) summary
    pfam00010
    Location:75 → 123
    HLH; Helix-loop-helix DNA-binding domain
    pfam12329
    Location:118 → 173
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
Nucleotide Protein
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