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LOC18007822 transcription factor BIM2 [ Eutrema salsugineum ]

Gene ID: 18007822, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18007822
Gene description
transcription factor BIM2
Locus tag
EUTSA_v10018889mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18007822 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256342.1 (5393591..5395797, complement)

NW_006256342.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18007820 Neighboring gene protease 2 Neighboring gene DNA-directed RNA polymerase 1, mitochondrial Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256342 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor BIM2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256342.1 Reference Eutsalg1_0

    Range
    5393591..5395797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006391003.2 → XP_006391065.1  transcription factor BIM2 isoform X2

    See identical proteins and their annotated locations for XP_006391065.1

    UniProtKB/TrEMBL
    V4MAX5
    Conserved Domains (1) summary
    pfam00010
    Location:48 → 97
    HLH; Helix-loop-helix DNA-binding domain

  2. XM_006391004.2 → XP_006391066.1  transcription factor BIM2 isoform X1

    See identical proteins and their annotated locations for XP_006391066.1

    UniProtKB/TrEMBL
    V4KEV1
    Conserved Domains (1) summary
    pfam00010
    Location:49 → 98
    HLH; Helix-loop-helix DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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