txid9913[Organism:noexp] AND (complex_rna[filt]) - Structure - NCBI

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Select item 2062461.

Molecular Structure Image for 7O7Y

Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)[RIBOSOME]

Taxonomy:: Oryctolagus cuniculus, Severe acute respiratory syndrome coronavirus 2, Bos taurus

Proteins:: 79
Nucleic acids:: (RNA)
Chemicals:: 791
modified:: 2024-04-29

MMDB ID:: 206246
PDB ID:: 7O7Y

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2027722.

Molecular Structure Image for 7O81

Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot[RIBOSOME]

Taxonomy:: Oryctolagus cuniculus, Severe acute respiratory syndrome coronavirus 2, Bos taurus

Proteins:: 80
Nucleic acids:: (RNA)
Chemicals:: 624
modified:: 2024-04-29

MMDB ID:: 202772
PDB ID:: 7O81

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2027713.

Molecular Structure Image for 7O80

Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site[RIBOSOME]

Taxonomy:: Oryctolagus cuniculus, Severe acute respiratory syndrome coronavirus 2, Bos taurus

Proteins:: 81
Nucleic acids:: (RNA)
Chemicals:: 741
modified:: 2024-04-29

MMDB ID:: 202771
PDB ID:: 7O80

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2027704.

Molecular Structure Image for 7O7Z

Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)[RIBOSOME]

Taxonomy:: Oryctolagus cuniculus, Severe acute respiratory syndrome coronavirus 2, Bos taurus

Proteins:: 79
Nucleic acids:: (RNA)
Chemicals:: 790
modified:: 2024-04-29

MMDB ID:: 202770
PDB ID:: 7O7Z

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 1934855.

Molecular Structure Image for 6YS3

Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide[RIBOSOME]

Taxonomy:: Escherichia coli BL21(DE3), Bos taurus

Proteins:: 29
Nucleic acids:: (RNA)
modified:: 2022-11-13

MMDB ID:: 193485
PDB ID:: 6YS3

View in iCn3D Similar Structures Proteins Conserved Domains

Select item 1925576.

Molecular Structure Image for 7JQM

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution[RIBOSOME]

Taxonomy:: Thermus thermophilus HB8, Tequatrovirus T4, Escherichia coli, Bos taurus

Proteins:: 50
Nucleic acids:: (RNA)
Chemicals:: 1082
modified:: 2023-11-21

MMDB ID:: 192557
PDB ID:: 7JQM

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 1925567.

Molecular Structure Image for 7JQL

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution[RIBOSOME]

Taxonomy:: Thermus thermophilus HB8, Tequatrovirus T4, Escherichia coli, Bos taurus

Proteins:: 50
Nucleic acids:: (RNA)
Chemicals:: 1324
modified:: 2023-11-21

MMDB ID:: 192556
PDB ID:: 7JQL

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 1831498.

Molecular Structure Image for 6QDW

Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide[RIBOSOME]

Taxonomy:: Escherichia coli BL21(DE3), Bos taurus

Proteins:: 29
Nucleic acids:: (RNA)
modified:: 2022-11-07

MMDB ID:: 183149
PDB ID:: 6QDW

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 1727409.

Molecular Structure Image for 6NF8

Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit -Class I[RIBOSOMAL PROTEIN]

Taxonomy:: Bos taurus, Homo sapiens

Proteins:: 31
Nucleic acids:: (RNA)
modified:: 2022-11-07

MMDB ID:: 172740
PDB ID:: 6NF8

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 17273910.

Molecular Structure Image for 6NEQ

Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit-Class-II[RIBOSOMAL PROTEIN]

Taxonomy:: Bos taurus, Homo sapiens

Proteins:: 31
Nucleic acids:: (RNA)
modified:: 2022-11-07

MMDB ID:: 172739
PDB ID:: 6NEQ

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 17122211.

Molecular Structure Image for 5HAU

Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome[Ribosome/Antibiotic]

Taxonomy:: Thermus thermophilus HB8, Tequatrovirus T4, Escherichia coli, Bos taurus

Proteins:: 53
Nucleic acids:: (RNA)
Chemicals:: 1016
modified:: 2024-03-11

MMDB ID:: 171222
PDB ID:: 5HAU

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 17120212.

Molecular Structure Image for 5F8K

Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome[RIBOSOME]

Taxonomy:: Thermus thermophilus HB8, synthetic construct, Escherichia coli K-12, Bos taurus

Proteins:: 50
Nucleic acids:: (RNA)
Chemicals:: 1235
modified:: 2024-04-29

MMDB ID:: 171202
PDB ID:: 5F8K

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 17092113.

Molecular Structure Image for 4UJE

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement[RIBOSOME]

Taxonomy:: Oryctolagus cuniculus, Bos taurus, Escherichia coli

Proteins:: 76
Nucleic acids:: (RNA)
modified:: 2021-03-03

MMDB ID:: 170921
PDB ID:: 4UJE

View in iCn3D PubMed Proteins Conserved Domains

Select item 15440714.

Molecular Structure Image for 5OIK

Structure of an RNA polymerase II-DSIF transcription elongation complex[TRANSCRIPTION]

Taxonomy:: Bos taurus, synthetic construct, Homo sapiens

Proteins:: 14
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 9
modified:: 2024-05-23

MMDB ID:: 154407
PDB ID:: 5OIK

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 14109215.

Molecular Structure Image for 3JD5

Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome[RIBOSOME]

Taxonomy:: Bos taurus

Proteins:: 32
Nucleic acids:: (RNA)
modified:: 2022-11-07

MMDB ID:: 141092
PDB ID:: 3JD5

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 13583716.

Molecular Structure Image for 5FLM

Structure of transcribing mammalian RNA polymerase II[TRANSCRIPTION]

Taxonomy:: Bos taurus, synthetic construct

Proteins:: 12
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 9
modified:: 2024-05-13

MMDB ID:: 135837
PDB ID:: 5FLM

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 11999517.

Molecular Structure Image for 2RU7

Refined structure of RNA aptamer in complex with the partial binding peptide of prion protein[Membrane Protein/RNA]

Taxonomy:: synthetic construct, Bos taurus

Proteins:: 2
Nucleic acids:: (RNA)
modified:: 2024-05-15

MMDB ID:: 119995
PDB ID:: 2RU7

View in iCn3D PubMed Proteins

Select item 10748418.

Molecular Structure Image for 2RSK

RNA aptamer against prion protein in complex with the partial binding peptide[Membrane Protein/RNA]

Taxonomy:: synthetic construct, Bos taurus

Proteins:: 2
Nucleic acids:: (RNA)
modified:: 2024-05-15

MMDB ID:: 107484
PDB ID:: 2RSK

View in iCn3D PubMed Proteins

Select item 10114119.

Molecular Structure Image for 3UZT

Structure of the C13.18 RNA Aptamer in Complex with G Protein-Coupled Receptor Kinase 2[TRANSFERASE/RNA]

Taxonomy:: Bos taurus, synthetic construct

Proteins:: 1
Nucleic acids:: (RNA)
Chemicals:: 1
modified:: 2023-09-18

MMDB ID:: 101141
PDB ID:: 3UZT

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 10114020.

Molecular Structure Image for 3UZS

Structure of the C13.28 RNA Aptamer Bound to the G Protein-Coupled Receptor Kinase 2-Heterotrimeric G Protein Beta 1 and Gamma 2 Subunit Complex[TRANSFERASE/RNA]

Taxonomy:: Bos taurus, synthetic construct

Proteins:: 3
Nucleic acids:: (RNA)
Chemicals:: 1
modified:: 2023-09-18

MMDB ID:: 101140
PDB ID:: 3UZS

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

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Protein Domain Families

Families (22)
Structures with functionally specific protein families
Superfamilies (22)
Structures with evolutionary related protein superfamilies

Complexes

Protein-Protein (22)
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Protein-DNA (2)
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