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SRX036782: Demonstration Project Reference Genome for Human Microbiome Project
1 ILLUMINA (Illumina Genome Analyzer II) run: 3.6M spots, 718.4M bases, 337.4Mb downloads

Design: Illumina sequencing of HMP Reference Genome for Escherichia coli MS 57-2 H_KT-57-2-0089503001 paired end RANDOM library
Submitted by: The Genome Center at Washington University School of Medicine in St. Louis (WUGSC)
Study: Demonstration Project Reference Genome for Human Microbiome Project
PRJNA47209 • SRP005008 • All experiments • All runs
show Abstracthide Abstract
This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).
Sample: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli MS 57-2
SAMN00189182 • SRS150864 • All experiments • All runs
Organism: Escherichia coli MS 57-2
Library:
Name: 2853155853
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward barcode
Group tagBasecalls
TTAGGCTTAGGC
CTTGTACTTGTA
ACAGTGACAGTG
CAGATCCAGATC
GCCAATGCCAAT
GGCTACGGCTAC
CGATGTCGATGT
ACTTGAACTTGA
TGACCATGACCA
GATCAGGATCAG
TAGCTTTAGCTT
ATCACGATCACG
107  reverse

Runs: 1 run, 3.6M spots, 718.4M bases, 337.4Mb
Run# of Spots# of BasesSizePublished
SRR0889203,592,128718.4M337.4Mb2011-01-29

ID:
43957

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