Transcriptome from Solanum habrochaites LA0407 - SRA

SRX1491061: Transcriptome from Solanum habrochaites LA0407
1 ILLUMINA (Illumina HiSeq 2000) run: 19.6M spots, 4G bases, 2.4Gb downloads

Submitted by: Indiana University

Study: Solanum section Lycopersicon phylotranscriptomic characterization

PRJNA305880 • SRP067562 • All experiments • All runs

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We sequenced 29 accessions from all 13 species of Solanum sect. Lycopersicon and 2 species from Solanum sect. Lycopersicoides. After mapping these data to the reference genome, we identified complex patterns of introgression, ancestral allele sorting, lineage-specific evolution and environmental selection.

Sample: Transcriptome from Solanum habrochaites LA0407

SAMN04348635 • SRS1212662 • All experiments • All runs

Organism: Solanum habrochaites

Library:

Name: LA0407

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Spot descriptor:

1 forward101 reverse

Runs: 1 run, 19.6M spots, 4G bases, 2.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR3031960	19,631,347	4G	2.4Gb	2016-02-02

ID:: 2101492

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Sequence Read Archive

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