ddRAD seq of Otomys species - SRA

SRX23605023: ddRAD seq of Otomys species
1 ILLUMINA (NextSeq 500) run: 478,553 spots, 136.1M bases, 60.4Mb downloads

Design: ddRAD with restriction enzymes EcoRI-HF and MspI

Submitted by: Institute of Vertebrate Biology CAS

Study: Integrative taxonomic revision of the thicket rats (Murinae: Grammomys) in sub-Saharan Africa decreases the number of currently recognized species

PRJNA1068813 • SRP489420 • All experiments • All runs

show Abstracthide Abstract

The bioproject contains 143 samples of raw ddRAD raw data from multispecies. Of these, 49 belong to Grammomys surdaster, 29 to Grammomys cometes, 26 to Grammomys polionops, 17 to Grammomys ibeanus, 13 to Grammomys dryas, 7 to Grammomys macmillani, and 2 to Grammomys dolichurus.

Sample:

SAMN39600823 • SRS20447386 • All experiments • All runs

Organism: Grammomys dolichurus

Library:

Name: TM39838_Grammomys_dolichurus

Instrument: NextSeq 500

Strategy: RAD-Seq

Source: GENOMIC

Selection: Restriction Digest

Layout: PAIRED

Runs: 1 run, 478,553 spots, 136.1M bases, 60.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR27948393	478,553	136.1M	60.4Mb	2024-02-12

ID:: 31877907

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity