Mapped reads for uncultivated Chloroflexi bacterium UBA10876 genome r... - SRA

SRX3572977: Mapped reads for uncultivated Chloroflexi bacterium UBA10876 genome recovered from SRX710579
1 ILLUMINA (Illumina HiSeq 2000) run: 1.2M spots, 245.3M bases, 143.2Mb downloads

Design: Reads from SRX710579 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10876 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Chloroflexi bacterium UBA10876 genome recovered from SRX710579

SAMN08017619 • SRS2843949 • All experiments • All runs

Organism: Chloroflexota bacterium

Library:

Name: UBA10876_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.2M spots, 245.3M bases, 143.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR6482997	1,237,262	245.3M	143.2Mb	2018-03-05

ID:: 4958479

SRA

Sequence Read Archive

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