Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX468444: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320011' containing sample '2088HD' from individual '1671003LGC'
1 ILLUMINA (Illumina HiSeq 2000) run: 5.4M spots, 1.1G bases, 512.7Mb downloads

UUID: 00ac8856-c153-4793-bfae-e8669e5cdbfe

Design: Illumina sequencing of Mycobacterium tuberculosis 2088HD via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - Romania

PRJNA233378 • SRP037432 • All experiments • All runs

Sample:

SAMN02567726 • SRS555869 • All experiments • All runs

Organism: Mycobacterium tuberculosis 2088HD

Library:

Name: Pond-320011

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 475450.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5DIND

material_type: DNA:DNA Somatic

product_order: PDO-2742

product_part_number: P-WG-0004

project: G57260

research_project: RP-114

root_sample_id: SM-4MHXF

sample_id: SM-5DIND

work_request: 39898

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 5.4M spots, 1.1G bases, 512.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1166122	5,428,479	1.1G	512.7Mb	2014-02-10

ID:: 648632

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