Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479992: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320875' containing sample 'CIDEIM-4-36361'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 772M bases, 336.3Mb downloads

UUID: 30be0039-7d6c-4092-8887-674057252c3a

Design: Illumina sequencing of Mycobacterium tuberculosis 36361 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - Taiwan

PRJNA227756 • SRP039318 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis 36361

SAMN02402667 • SRS565197 • All experiments • All runs

Organism: Mycobacterium tuberculosis 36361

Library:

Name: Pond-320875

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 455360.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:59EX7

material_type: DNA:DNA Somatic

product_order: PDO-2505

product_part_number: P-WG-0004

project: G54082

research_project: RP-114

root_sample_id: SM-4Q56W

sample_id: SM-59EX7

work_request: 39447

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-25 22:40:03.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 772M bases, 336.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180947	1,869,876	377.7M	162Mb	2014-03-01
SRR1180999	1,951,928	394.3M	174.3Mb	2014-03-01

ID:: 669426

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