Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

SRX337740: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Agona str. SA-3 by 454 GS FLX
1 LS454 (454 GS FLX) run: 179,208 spots, 92.5M bases, 206.5Mb downloads

Design: 454 deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: Salmonella enterica subsp. enterica serovar Agona str. SA-3 genome sequencing

PRJNA65257 • SRP029029 • All experiments • All runs

Sample: Pathogen bacterial, clinical or host-associated sample from Salmonella enterica subsp. enterica serovar Agona str. SA-3

SAMN01814027 • SRS472146 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Agona str. SA-3

Library:

Name: Salmonella enterica str. CFSAN000503_01 shotgun

Instrument: 454 GS FLX

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Construction protocol: A Roche 454 GS FLX Titanium fragment library was created for Salmonella enterica str. CFSAN000503_01.

Spot descriptor:

5 forward

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	454 Data Acquisition	2.8

Runs: 1 run, 179,208 spots, 92.5M bases, 206.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR955184	179,208	92.5M	206.5Mb	2013-11-15

ID:: 475203

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