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SRX1741293: cockatiel2
1 ILLUMINA (Illumina MiSeq) run: 627,543 spots, 377.2M bases, 272.2Mb downloads

Design: Fecal samples from three adult and healthy cockatiels (Nymphicus hollandicus), metagenomic DNA extraction using MOBIO powersoil kit, and PCR amplification using high fidelity DNA polymerase and primers 341F and 805R of 16S rRNA gene as indicated in 16S amplicon guide of Illumina Miseq
Submitted by: Universidad Nacional Autonoma de Mexico
Study: Cockatiel microbiome Raw sequence reads
show Abstracthide Abstract
Given the wide distribution of Cockatiels as pets it is important to research on the biodiversity of bacteria associated with these birds. In this paper we describe the gut microbial diversity of three healthy adult cockatiels by the use of next generation sequencing and analysis of ribosomal 16S gene, additionally Cockatiel’s diversity is also compared with that observed in other herbivorous birds.
Sample: cockatiel microbiome 2
SAMN04932281 • SRS1420867 • All experiments • All runs
Organism: gut metagenome
Library:
Name: cockatiel2
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 627,543 spots, 377.2M bases, 272.2Mb
Run# of Spots# of BasesSizePublished
SRR3473942627,543377.2M272.2Mb2016-12-01

ID:
2497099

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