GSM4879605: Normal1; Homo sapiens; RNA-Seq - SRA

SRX9430913: GSM4879605: Normal1; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 48M spots, 7.2G bases, 2.1Gb downloads

Submitted by: NCBI (GEO)

Study: Different expression of lincRNAs between wild type and oxaliplatin resistant HepG2 cell line

PRJNA674578 • SRP291116 • All experiments • All runs

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We found that there were 2109 differentially expressed lincRNAs between oxaliplatin resistant and wild type HCC cells, of which 1109 were up-regulated lincRNAs and 1000 were down-regulated lincRNAs. Overall design: According to the construction method of drug-resistant HepG2 cells, we screened oxaliplatin resistant cells, detected the expression of lincRNA in drug-resistant cell lines and wild-type cell lines, and analyzed the up-regulated and down-regulated lincRNAs after summarizing the differentially expressed lincRNAs.

Sample: GEO accession GSM4879605 is currently private and is scheduled to be released on Nov 03, 2022.

SAMN16661621 • SRS7645372 • All experiments • All runs

Organism: Homo sapiens

Library:

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Different groups of HepG2 cell lines were flash frozen on dry ice, and RNA was harvested using Trizol reagent.We used 2 ug total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard nova6000 Illumina PE150 protocol.

Experiment attributes:

GEO Accession: GSM4879605

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 48M spots, 7.2G bases, 2.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR12979094	48,003,001	7.2G	2.1Gb	2022-11-10

ID:: 12326244

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