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SRX9101455: GSM4774144: 2BC4: Animal 4 treated PFC; Rattus norvegicus; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 58.3M spots, 4.4G bases, 1.5Gb downloads

Submitted by: NCBI (GEO)
Study: Cranial manipulation modulates cholinergic pathway gene expression in an animal model of age-related cognitive decline
show Abstracthide Abstract
In this study, we examine the effect of cranial osteopathic manipulation (COM) on gene expression, in an animal model for age-related cognitive decline (aged rats). We found that COM significantly affected the expression of 36 genes in the neuronal pathway (False Discovery Rate (FDR) < 0.004). The top five neuronal genes with the largest fold-change (Slc5a7, Chat, Slc18a3, Adcy5 and Cacna2d2, >2-fold change, FDR<0.004) are part of the cholinergic neurotransmission mechanism, which is known to affect cognitive function. Overall design: Compare gene expression from RNA sequencing of tissue samples from prefrontal cortex of aged rats that have undergone cranial osteopathic manipulation to aged rats that did not receive the treatment
Sample: 2BC4: Animal 4 treated PFC
SAMN16090090 • SRS7345468 • All experiments • All runs
Library:
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Rats were euthanized by cervical dislocation after seven days. Using a rat brain matrix, a 1mm coronal section from the dorsal end of prefrontal cortex was sampled from the euthanized rats. RNA was extracted using the PureLink™ RNA Mini Kit RNA libraries were prepared for sequencing using standard Illumina protocols
Experiment attributes:
GEO Accession: GSM4774144
Links:
Runs: 1 run, 58.3M spots, 4.4G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
SRR1261845258,283,7124.4G1.5Gb2020-09-11

ID:
11824548

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