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SRX8548922: GSM4616537: N01F_iNSLC_P1; Sus scrofa; RNA-Seq
1 ILLUMINA (HiSeq X Ten) run: 20.5M spots, 6.2G bases, 2.6Gb downloads

Submitted by: NCBI (GEO)
Study: Non-viral Induction of Transgene-free iPSCs from Somatic Fibroblasts of Multiple Mammalian Species [pig]
show Abstracthide Abstract
Induced pluripotent stem cells (iPSCs) are capable of providing an unlimited source of cells from all three germ layers as well as germ cells. The derivation and usage of iPSCs from various animal models may facilitate stem-cell-based therapy, generation of gene-modified animals, and evolutionary studies assessing interspecies differences. However, there is a lack of species-wide methods for deriving iPSCs, in particular by means of non-viral and non-transgene-integrating (NTI) approaches. Here, we demonstrated the derivation of iPSCs from somatic fibroblasts of multiple mammalian species from three different taxonomic orders, including the common marmoset (Callithrix jacchus) in Primates, the dog (Canis lupus familiaris) in Carnivora, and the pig (Sus scrofa) in Cetartiodactyla, by combinatorial usage of chemical compounds and NTI episomal vectors. Interestingly, the somatic fibroblasts temporarily acquired a neural stem cell (NSC)-like state during the reprogramming procedure. Collectively, our method, robustly applicable to various species, holds a great potential for facilitating stem-cell-based research using various animals in Mammalia. Overall design: RNA seq of porcine fibroblasts, iNSLCs, and iPSCs
Sample: N01F_iNSLC_P1
SAMN15238437 • SRS6842909 • All experiments • All runs
Organism: Sus scrofa
Library:
Instrument: HiSeq X Ten
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNeasy Mini Kit (Qiagen) RNA libraries were prepared for sequencing using standard Illumina protocols
Experiment attributes:
GEO Accession: GSM4616537
Links:
Runs: 1 run, 20.5M spots, 6.2G bases, 2.6Gb
Run# of Spots# of BasesSizePublished
SRR1201621020,537,6646.2G2.6Gb2020-10-02

ID:
11108389

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