GSM1584053: JQ1+ (UJ006); Mus musculus; RNA-Seq - SRA

SRX840267: GSM1584053: JQ1+ (UJ006); Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 49.4M spots, 10G bases, 6Gb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: RNA profiling for mouse B cells by drug treatment

PRJNA272534 • SRP052070 • All experiments • All runs

show Abstracthide Abstract

We used genome-wide transcriptome analysis to profile the mRNA, long noncoding RNA (lncRNA) expression of mouse splenic B cells which were treated with JQ1+ (80nM), Flavopiridol (30nM) and Control for 3 days. Overall design: CD43+ negative isolated mouse splenic B cells (CD43-) were teated with Trizol for RNA preparation.

Sample: JQ1+ (UJ006)

SAMN03283230 • SRS817091 • All experiments • All runs

Organism: Mus musculus

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: total RNA was extracted with Trizol, rRNA was depleted with the Ribo-Zero rRNA removal kit (Epicentre) RNA libraries were prepared for sequencing using standard Illumina protocols

Experiment attributes:

GEO Accession: GSM1584053

Links:

External link: GEO Sample GSM1584053

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 49.4M spots, 10G bases, 6Gb

Run	# of Spots	# of Bases	Size	Published
SRR1755063	49,447,416	10G	6Gb	2018-01-02

ID:: 1190085

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