GSM4454076: African Bush Elephant PBMC 14; Loxodonta africana; RNA-Seq - SRA

SRX8060313: GSM4454076: African Bush Elephant PBMC 14; Loxodonta africana; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 115.5M spots, 28.9G bases, 12.9Gb downloads

Submitted by: NCBI (GEO)

Study: How to Make an Elephant: Functional Genomic Divergence and the Evolution of Cancer Suppression

PRJNA623216 • SRP255306 • All experiments • All runs

show Abstracthide Abstract

Contrast the genomes of different elephants species to find genetic differences underlying species differences like immune system differences that impact disease resistance. Overall design: Define genes that are differentially expressed between Asian and African Elephants. The Asian elephant is in the SRA database under SRP065915 and BioProject PRJNA301482.

Sample: African Bush Elephant PBMC 14

SAMN14541774 • SRS6428967 • All experiments • All runs

Organism: Loxodonta africana

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Ficoll-Paque density gradient, 3 washes Illumina TruSeq Stranded RNA kit with Ribo-Zero Gold

Experiment attributes:

GEO Accession: GSM4454076

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 115.5M spots, 28.9G bases, 12.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR11484178	115,507,778	28.9G	12.9Gb	2020-09-11

ID:: 10502713

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity