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SRX7883577: GSM4404071: 1502_IRN_24h_3; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 3000) run: 33.1M spots, 1.7G bases, 586.3Mb downloads

Submitted by: NCBI (GEO)
Study: Evaluation of Eribulin Combined with Irinotecan for Treatment of Pediatric Cancer Xenografts
show Abstracthide Abstract
Eribulin, irinotecan, and the combination were studied in ES4 xenograft model. RNAs from xenograft tumors were harvested at 24h and 144h after single agent or combination treatment to analyze gene expression. Overall design: Gene expression profiles were generated using RNA-seq with 3 replicates at each time point (3 tumors from 3 separate mice) and 3 control samples (no treatment).
Sample: 1502_IRN_24h_3
SAMN14341498 • SRS6293807 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 3000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Total RNA was extracted from snap-frozen xenografts chilled under liquid nitrogen to prevent thawing. RNA was extracted with TRIzol reagent and purified on an RNeasy mini column (Qiagen). On-column DNase digestion was performed with Qiagen RNase-free DNase kit. RNA-seq library preparation by following the Illumina TruSeq stranded mRNA sample preparation guide
Experiment attributes:
GEO Accession: GSM4404071
Links:
Runs: 1 run, 33.1M spots, 1.7G bases, 586.3Mb
Run# of Spots# of BasesSizePublished
SRR1127733433,144,8801.7G586.3Mb2020-03-11

ID:
10313361

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